Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RPS2P1-201ENST00000434010 821 ntBASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 AC093909.1-201ENST00000504731 1122 ntBASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 FAM215A-202ENST00000632077 792 ntBASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 NEFHP1-201ENST00000412845 2629 ntBASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN1Q9UMX0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AC138932.1-201ENST00000534164 6830 ntBASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 OR7E14P-202ENST00000530490 1290 ntBASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN1Q9UMX0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 AC006116.8-202ENST00000587620 1550 ntBASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 STK19B-204ENST00000512515 211 ntBASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 MIR7706-201ENST00000613747 67 ntBASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN1Q9UMX0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 AC004817.3-201ENST00000602957 2129 ntBASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 LINC01451-201ENST00000623792 534 ntBASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 AC107918.4-202ENST00000641623 219 ntBASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN1Q9UMX0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms