Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC025062.2-201ENST00000605477 670 ntBASIC18.65■□□□□ 0.58
CDH9Q9ULB4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH9Q9ULB4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH9Q9ULB4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.64■□□□□ 0.58
CDH9Q9ULB4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.64■□□□□ 0.58
CDH9Q9ULB4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH9Q9ULB4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 RPS2P28-201ENST00000314255 741 ntBASIC18.64■□□□□ 0.57
CDH9Q9ULB4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 HNRNPDP1-201ENST00000439535 754 ntBASIC18.64■□□□□ 0.57
CDH9Q9ULB4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 LINC01451-201ENST00000623792 534 ntBASIC18.64■□□□□ 0.57
CDH9Q9ULB4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH9Q9ULB4 NOC2LP1-202ENST00000452600 2235 ntBASIC18.64■□□□□ 0.57
CDH9Q9ULB4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 STK19B-204ENST00000512515 211 ntBASIC18.63■□□□□ 0.57
CDH9Q9ULB4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 FAM215A-202ENST00000632077 792 ntBASIC18.63■□□□□ 0.57
CDH9Q9ULB4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH9Q9ULB4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 RPS2P1-201ENST00000434010 821 ntBASIC18.62■□□□□ 0.57
CDH9Q9ULB4 AC093909.1-201ENST00000504731 1122 ntBASIC18.62■□□□□ 0.57
CDH9Q9ULB4 AC079776.4-201ENST00000511039 504 ntBASIC18.62■□□□□ 0.57
CDH9Q9ULB4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 OR7E14P-202ENST00000530490 1290 ntBASIC18.62■□□□□ 0.57
CDH9Q9ULB4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 HCG11-201ENST00000411553 5696 ntBASIC18.62■□□□□ 0.57
CDH9Q9ULB4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms