Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
NPC1L1Q9UHC9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPC1L1Q9UHC9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NPC1L1Q9UHC9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 AF186996.4-201ENST00000467186 377 ntBASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 AL139424.1-201ENST00000607572 797 ntBASIC23.65■■□□□ 1.38
NPC1L1Q9UHC9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC23.64■■□□□ 1.38
NPC1L1Q9UHC9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.64■■□□□ 1.38
NPC1L1Q9UHC9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 AC064862.7-201ENST00000604520 867 ntBASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 AC004706.3-202ENST00000621574 984 ntBASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 AC008735.5-201ENST00000623544 497 ntBASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 FAM215A-202ENST00000632077 792 ntBASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.64■■□□□ 1.37
NPC1L1Q9UHC9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 HLA-A-201ENST00000376802 1334 ntBASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 AC073621.1-201ENST00000392730 636 ntBASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPC1L1Q9UHC9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 AC139887.3-201ENST00000568585 713 ntBASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPC1L1Q9UHC9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 LINC00982-205ENST00000420957 435 ntBASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 RPS2P1-201ENST00000434010 821 ntBASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPC1L1Q9UHC9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPC1L1Q9UHC9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms