Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 MTATP6P19-201ENST00000413797 659 ntBASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 KRT126P-201ENST00000549467 1181 ntBASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 AC091304.2-201ENST00000564639 760 ntBASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 AL138688.1-201ENST00000624851 1594 ntBASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 AC012317.2-201ENST00000623305 2251 ntBASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRDM9Q9NQV7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
PRDM9Q9NQV7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PRDM9Q9NQV7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRDM9Q9NQV7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRDM9Q9NQV7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 AL450487.1-201ENST00000426799 995 ntBASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 KRT18P31-201ENST00000506277 1292 ntBASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 LINC01711-201ENST00000598340 967 ntBASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 AC011467.2-201ENST00000598425 242 ntBASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRDM9Q9NQV7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 AC007967.3-201ENST00000434308 558 ntBASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.69■□□□□ 0.26
PRDM9Q9NQV7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms