Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 TSPY12P-201ENST00000421279 868 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 RN7SL606P-201ENST00000472779 293 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 GUSBP12-201ENST00000513727 720 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 MIR3180-1-201ENST00000580374 94 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC090616.6-201ENST00000582640 721 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 MIR3180-3-201ENST00000584616 94 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AP002414.4-201ENST00000589764 1148 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AC124864.1-201ENST00000623408 392 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AL096828.2-201ENST00000567259 1965 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 AD000864.1-201ENST00000624076 2295 ntBASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NECTIN3Q9NQS3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.96■□□□□ 0.3
NECTIN3Q9NQS3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 AL592071.1-201ENST00000611956 408 ntBASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.95■□□□□ 0.3
NECTIN3Q9NQS3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NECTIN3Q9NQS3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms