Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 AC130371.2-201ENST00000619443 611 ntBASIC15.29■□□□□ 0.04
IFT46Q9NQC8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 AC126755.1-201ENST00000525846 6405 ntBASIC15.29■□□□□ 0.04
IFT46Q9NQC8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT46Q9NQC8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 AC133681.1-201ENST00000465482 601 ntBASIC15.28■□□□□ 0.04
IFT46Q9NQC8 RNA5SP413-201ENST00000516373 109 ntBASIC15.28■□□□□ 0.04
IFT46Q9NQC8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 AC142086.2-201ENST00000569753 217 ntBASIC15.28■□□□□ 0.04
IFT46Q9NQC8 MIR6786-201ENST00000616843 113 ntBASIC15.28■□□□□ 0.04
IFT46Q9NQC8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.28■□□□□ 0.04
IFT46Q9NQC8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
IFT46Q9NQC8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.27■□□□□ 0.03
IFT46Q9NQC8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms