Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NEUROD4Q9HD90 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NEUROD4Q9HD90 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
NEUROD4Q9HD90 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 KRT18P56-201ENST00000507275 550 ntBASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 AL390719.2-201ENST00000606993 987 ntBASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 LINC01311-201ENST00000565162 1445 ntBASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEUROD4Q9HD90 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 AC005104.2-201ENST00000427818 678 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 MTCL1P1-201ENST00000446207 792 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 VENTXP5-201ENST00000523979 775 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 AC005332.3-201ENST00000589904 676 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 HYMAI.1-201ENST00000620949 238 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 AC108860.2-201ENST00000562760 2183 ntBASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
NEUROD4Q9HD90 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms