Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CNN2P3-201ENST00000450201 906 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 AL513480.1-201ENST00000451731 511 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 TERF1P3-201ENST00000505638 1227 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 AL136317.3-201ENST00000618497 906 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 AC055876.3-201ENST00000431496 288 ntBASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 AC012645.4-201ENST00000610691 1061 ntBASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 AC138649.4-201ENST00000612222 287 ntBASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZFYVE28Q9HCC9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 AC236430.1-201ENST00000402231 743 ntBASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 FAM86C2P-203ENST00000528684 1004 ntBASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 AC005225.4-201ENST00000557330 545 ntBASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 AC116407.2-201ENST00000613639 860 ntBASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZFYVE28Q9HCC9 AC005332.7-201ENST00000614046 2005 ntBASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 BX276092.7-203ENST00000637198 1536 ntBASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 AL671277.1-201ENST00000429656 993 ntBASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZFYVE28Q9HCC9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms