Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.71■■□□□ 1.07
UPF2Q9HAU5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
UPF2Q9HAU5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 REXO1L11P-201ENST00000620964 1927 ntBASIC21.7■■□□□ 1.06
UPF2Q9HAU5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 LINC00167-201ENST00000530583 1419 ntBASIC21.7■■□□□ 1.06
UPF2Q9HAU5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
UPF2Q9HAU5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.69■■□□□ 1.06
UPF2Q9HAU5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 DDX43P3-201ENST00000441064 443 ntBASIC21.69■■□□□ 1.06
UPF2Q9HAU5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF2Q9HAU5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.68■■□□□ 1.06
UPF2Q9HAU5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 AC106886.4-201ENST00000623557 2502 ntBASIC21.68■■□□□ 1.06
UPF2Q9HAU5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF2Q9HAU5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 ABHD17AP1-201ENST00000358206 933 ntBASIC21.67■■□□□ 1.06
UPF2Q9HAU5 KRT18P29-201ENST00000397031 1267 ntBASIC21.67■■□□□ 1.06
UPF2Q9HAU5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.67■■□□□ 1.06
UPF2Q9HAU5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms