Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 COX20P2-201ENST00000452636 358 ntBASIC19.21■□□□□ 0.67
HIPK3Q9H422 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 STK25P1-201ENST00000585406 838 ntBASIC19.21■□□□□ 0.67
HIPK3Q9H422 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 AC239800.4-201ENST00000603712 296 ntBASIC19.21■□□□□ 0.67
HIPK3Q9H422 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIPK3Q9H422 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
HIPK3Q9H422 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.21■□□□□ 0.66
HIPK3Q9H422 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 AC004461.1-201ENST00000412461 403 ntBASIC19.2■□□□□ 0.66
HIPK3Q9H422 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 AL353135.1-201ENST00000606729 504 ntBASIC19.2■□□□□ 0.66
HIPK3Q9H422 AC092902.6-201ENST00000641783 218 ntBASIC19.2■□□□□ 0.66
HIPK3Q9H422 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIPK3Q9H422 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HIPK3Q9H422 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
HIPK3Q9H422 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIPK3Q9H422 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.19■□□□□ 0.66
HIPK3Q9H422 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.18■□□□□ 0.66
HIPK3Q9H422 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HIPK3Q9H422 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK3Q9H422 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
HIPK3Q9H422 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.18■□□□□ 0.66
HIPK3Q9H422 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms