Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC096633.1-201ENST00000422446 749 ntBASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC007967.3-201ENST00000434308 558 ntBASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC079781.3-201ENST00000449110 356 ntBASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 KRT8P10-201ENST00000450021 1447 ntBASIC14.75□□□□□ -0.05
SSBP3Q9BWW4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 AL160237.2-201ENST00000556165 472 ntBASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 AC008608.2-201ENST00000606089 416 ntBASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP3Q9BWW4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms