Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPAP1Q9BWH6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPAP1Q9BWH6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 AP005117.1-201ENST00000584346 1413 ntBASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 ABCD1P5-201ENST00000445663 754 ntBASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 AC145285.3-201ENST00000564603 959 ntBASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP1Q9BWH6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 AL139288.1-201ENST00000623748 933 ntBASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 AC097374.2-201ENST00000618617 1306 ntBASIC21.4■■□□□ 1.02
RPAP1Q9BWH6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 SART3-203ENST00000546611 1184 ntBASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP1Q9BWH6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms