Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CHRDL1Q9BU40 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRDL1Q9BU40 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHRDL1Q9BU40 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.08□□□□□ -0.16
CHRDL1Q9BU40 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
CHRDL1Q9BU40 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 TERF1P1-201ENST00000311003 1181 ntBASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 AC211429.1-201ENST00000415277 523 ntBASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 COX11P1-201ENST00000489116 835 ntBASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHRDL1Q9BU40 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 AL645608.8-201ENST00000606034 2086 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 AD000864.1-201ENST00000624076 2295 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 PVRIG2P-201ENST00000435460 978 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 AL441883.1-201ENST00000566170 1045 ntBASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHRDL1Q9BU40 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms