Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TSPY18P-201ENST00000441642 509 ntBASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 AC091304.2-201ENST00000564639 760 ntBASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCM2Q9BSQ5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCM2Q9BSQ5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 INTS4P1-201ENST00000438455 1935 ntBASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 MIR5100-201ENST00000579544 119 ntBASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2Q9BSQ5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 AC103564.2-201ENST00000432853 1299 ntBASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 DUSP5P1-201ENST00000441325 1139 ntBASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 KRT18P31-201ENST00000506277 1292 ntBASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 LINC01451-201ENST00000623792 534 ntBASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2Q9BSQ5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 KRT126P-201ENST00000549467 1181 ntBASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 AL591684.3-201ENST00000605187 298 ntBASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 AC012313.10-201ENST00000623509 926 ntBASIC17.37■□□□□ 0.37
CCM2Q9BSQ5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms