Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.82■□□□□ 0.28
CGREF1Q99674 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
CGREF1Q99674 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGREF1Q99674 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
CGREF1Q99674 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
CGREF1Q99674 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
CGREF1Q99674 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CGREF1Q99674 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.81■□□□□ 0.28
CGREF1Q99674 AC128688.1-201ENST00000487626 519 ntBASIC16.81■□□□□ 0.28
CGREF1Q99674 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.81■□□□□ 0.28
CGREF1Q99674 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CGREF1Q99674 NEK4P2-201ENST00000580004 1012 ntBASIC16.81■□□□□ 0.28
CGREF1Q99674 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.81■□□□□ 0.28
CGREF1Q99674 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.81■□□□□ 0.28
CGREF1Q99674 AL157888.1-201ENST00000631930 593 ntBASIC16.81■□□□□ 0.28
CGREF1Q99674 AC106886.4-201ENST00000623557 2502 ntBASIC16.81■□□□□ 0.28
CGREF1Q99674 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
CGREF1Q99674 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.81■□□□□ 0.28
CGREF1Q99674 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGREF1Q99674 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
CGREF1Q99674 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 AC016396.2-201ENST00000562575 1417 ntBASIC16.8■□□□□ 0.28
CGREF1Q99674 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.8■□□□□ 0.28
CGREF1Q99674 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CGREF1Q99674 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CGREF1Q99674 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CGREF1Q99674 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
CGREF1Q99674 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CGREF1Q99674 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
CGREF1Q99674 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
CGREF1Q99674 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
CGREF1Q99674 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGREF1Q99674 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.79■□□□□ 0.28
CGREF1Q99674 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.79■□□□□ 0.28
CGREF1Q99674 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms