Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC25.16■■□□□ 1.62
SCAF11Q99590 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC25.16■■□□□ 1.62
SCAF11Q99590 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
SCAF11Q99590 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SCAF11Q99590 AC019129.2-201ENST00000609837 1235 ntBASIC25.16■■□□□ 1.62
SCAF11Q99590 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 AC135776.1-201ENST00000319817 2481 ntBASIC25.16■■□□□ 1.62
SCAF11Q99590 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.16■■□□□ 1.62
SCAF11Q99590 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.16■■□□□ 1.62
SCAF11Q99590 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.16■■□□□ 1.62
SCAF11Q99590 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 PTCHD3P3-201ENST00000403073 906 ntBASIC25.15■■□□□ 1.62
SCAF11Q99590 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF11Q99590 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SCAF11Q99590 GGTLC5P-201ENST00000617623 998 ntBASIC25.15■■□□□ 1.62
SCAF11Q99590 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF11Q99590 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF11Q99590 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF11Q99590 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
SCAF11Q99590 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SCAF11Q99590 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF11Q99590 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SCAF11Q99590 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.14■■□□□ 1.61
SCAF11Q99590 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
SCAF11Q99590 AL627223.1-201ENST00000416693 442 ntBASIC25.14■■□□□ 1.61
SCAF11Q99590 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
SCAF11Q99590 AC093214.1-201ENST00000511688 1107 ntBASIC25.14■■□□□ 1.61
SCAF11Q99590 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 IGHV3OR16-6-201ENST00000568775 360 ntBASIC25.14■■□□□ 1.61
SCAF11Q99590 MED16-214ENST00000617672 554 ntTSL 5 BASIC25.14■■□□□ 1.61
SCAF11Q99590 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SCAF11Q99590 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF11Q99590 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.14■■□□□ 1.61
SCAF11Q99590 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF11Q99590 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SCAF11Q99590 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.13■■□□□ 1.61
SCAF11Q99590 AC067863.1-201ENST00000494933 530 ntBASIC25.13■■□□□ 1.61
SCAF11Q99590 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC25.13■■□□□ 1.61
SCAF11Q99590 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
SCAF11Q99590 AL353135.1-201ENST00000606729 504 ntBASIC25.13■■□□□ 1.61
SCAF11Q99590 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SCAF11Q99590 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC25.12■■□□□ 1.61
SCAF11Q99590 AC092919.2-201ENST00000623631 1645 ntBASIC25.12■■□□□ 1.61
SCAF11Q99590 REM2-202ENST00000536884 1331 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF11Q99590 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SCAF11Q99590 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF11Q99590 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.12■■□□□ 1.61
SCAF11Q99590 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.12■■□□□ 1.61
SCAF11Q99590 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC25.12■■□□□ 1.61
SCAF11Q99590 YTHDF3-AS1-201ENST00000603538 718 ntBASIC25.12■■□□□ 1.61
SCAF11Q99590 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF11Q99590 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF11Q99590 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF11Q99590 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 AC006116.8-202ENST00000587620 1550 ntBASIC25.11■■□□□ 1.61
SCAF11Q99590 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC25.11■■□□□ 1.61
SCAF11Q99590 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms