Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 SAPCD2P3-201ENST00000455031 850 ntBASIC18.22■□□□□ 0.51
RPRD1AQ96P16 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AC103564.2-201ENST00000432853 1299 ntBASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPRD1AQ96P16 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 ABCD1P5-201ENST00000445663 754 ntBASIC18.2■□□□□ 0.5
RPRD1AQ96P16 FAAHP1-202ENST00000446499 1238 ntBASIC18.2■□□□□ 0.5
RPRD1AQ96P16 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 AP001269.4-201ENST00000609611 512 ntBASIC18.2■□□□□ 0.5
RPRD1AQ96P16 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPRD1AQ96P16 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 AC008764.6-201ENST00000595909 2069 ntBASIC18.19■□□□□ 0.5
RPRD1AQ96P16 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms