Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC103564.2-201ENST00000432853 1299 ntBASIC14.92□□□□□ -0.02
SPG11Q96JI7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 SIGLEC30P-201ENST00000455569 941 ntBASIC14.92□□□□□ -0.02
SPG11Q96JI7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 AL020989.1-201ENST00000422979 469 ntBASIC14.92□□□□□ -0.02
SPG11Q96JI7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 AC093520.2-201ENST00000561830 333 ntBASIC14.92□□□□□ -0.02
SPG11Q96JI7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 TSPY16P-201ENST00000449843 468 ntBASIC14.91□□□□□ -0.02
SPG11Q96JI7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 AL353135.1-201ENST00000606729 504 ntBASIC14.91□□□□□ -0.02
SPG11Q96JI7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 AC023141.13-201ENST00000604991 943 ntBASIC14.91□□□□□ -0.02
SPG11Q96JI7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPG11Q96JI7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPG11Q96JI7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC018445.3-201ENST00000624177 1945 ntBASIC14.9□□□□□ -0.02
SPG11Q96JI7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 RNA5SP421-201ENST00000516864 134 ntBASIC14.9□□□□□ -0.02
SPG11Q96JI7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms