Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ITCHQ96J02 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.86■□□□□ 0.29
ITCHQ96J02 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
ITCHQ96J02 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.86■□□□□ 0.29
ITCHQ96J02 TSPY15P-201ENST00000457163 923 ntBASIC16.86■□□□□ 0.29
ITCHQ96J02 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.86■□□□□ 0.29
ITCHQ96J02 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.86■□□□□ 0.29
ITCHQ96J02 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.86■□□□□ 0.29
ITCHQ96J02 NKILA-202ENST00000614771 2598 ntBASIC16.86■□□□□ 0.29
ITCHQ96J02 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 KRT8P47-201ENST00000604727 1398 ntBASIC16.86■□□□□ 0.29
ITCHQ96J02 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
ITCHQ96J02 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.85■□□□□ 0.29
ITCHQ96J02 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.85■□□□□ 0.29
ITCHQ96J02 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.85■□□□□ 0.29
ITCHQ96J02 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.85■□□□□ 0.29
ITCHQ96J02 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.85■□□□□ 0.29
ITCHQ96J02 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.85■□□□□ 0.29
ITCHQ96J02 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.85■□□□□ 0.29
ITCHQ96J02 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.85■□□□□ 0.29
ITCHQ96J02 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITCHQ96J02 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ITCHQ96J02 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ITCHQ96J02 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ITCHQ96J02 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ITCHQ96J02 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.84■□□□□ 0.29
ITCHQ96J02 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.84■□□□□ 0.29
ITCHQ96J02 TMEM191A-211ENST00000637163 1067 ntBASIC16.84■□□□□ 0.29
ITCHQ96J02 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.84■□□□□ 0.29
ITCHQ96J02 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.84■□□□□ 0.29
ITCHQ96J02 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITCHQ96J02 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.84■□□□□ 0.29
ITCHQ96J02 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ITCHQ96J02 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ITCHQ96J02 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ITCHQ96J02 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ITCHQ96J02 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ITCHQ96J02 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms