Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 YBX2P1-201ENST00000394192 760 ntBASIC17.67■□□□□ 0.42
SIPA1Q96FS4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 AC092183.1-201ENST00000469884 875 ntBASIC17.67■□□□□ 0.42
SIPA1Q96FS4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 AC109462.3-201ENST00000573934 613 ntBASIC17.67■□□□□ 0.42
SIPA1Q96FS4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 BX276092.7-203ENST00000637198 1536 ntBASIC17.67■□□□□ 0.42
SIPA1Q96FS4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.67■□□□□ 0.42
SIPA1Q96FS4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 HTR7P1-202ENST00000624664 4411 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 NCF1C-201ENST00000438382 1427 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC148477.5-201ENST00000625164 1645 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 RPSAP43-201ENST00000402237 625 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 GPX1P2-201ENST00000429271 606 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC002347.1-201ENST00000569543 541 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC064836.3-201ENST00000607928 673 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC055717.3-201ENST00000622967 595 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 AC100803.2-201ENST00000562459 1963 ntBASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIPA1Q96FS4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 AC018445.3-201ENST00000624177 1945 ntBASIC17.65■□□□□ 0.42
SIPA1Q96FS4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms