Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AC104692.2-201ENST00000603054 253 ntBASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AL121912.1-201ENST00000603683 238 ntBASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AC019129.2-201ENST00000609837 1235 ntBASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AL355877.3-201ENST00000622820 899 ntBASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AP000867.4-201ENST00000641616 219 ntBASIC17.54■□□□□ 0.4
SCAMP4Q969E2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AC109462.3-201ENST00000573934 613 ntBASIC17.53■□□□□ 0.4
SCAMP4Q969E2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AD001527.2-201ENST00000622994 785 ntBASIC17.53■□□□□ 0.4
SCAMP4Q969E2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AC134043.2-201ENST00000624206 2238 ntBASIC17.53■□□□□ 0.4
SCAMP4Q969E2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AC067852.2-201ENST00000590513 2313 ntBASIC17.53■□□□□ 0.4
SCAMP4Q969E2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAMP4Q969E2 AC068880.1-201ENST00000507289 2297 ntBASIC17.52■□□□□ 0.4
SCAMP4Q969E2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 RBM17P3-201ENST00000417687 1192 ntBASIC17.52■□□□□ 0.4
SCAMP4Q969E2 FGFR3P6-201ENST00000457012 610 ntBASIC17.52■□□□□ 0.4
SCAMP4Q969E2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 TP73-AS1-207ENST00000624167 988 ntBASIC17.52■□□□□ 0.4
SCAMP4Q969E2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAMP4Q969E2 PMPCAP1-201ENST00000508114 1576 ntBASIC17.52■□□□□ 0.39
SCAMP4Q969E2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 AL355312.1-201ENST00000407115 2176 ntBASIC17.52■□□□□ 0.39
SCAMP4Q969E2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAMP4Q969E2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAMP4Q969E2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAMP4Q969E2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAMP4Q969E2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAMP4Q969E2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.51■□□□□ 0.39
SCAMP4Q969E2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms