Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 AC145285.3-201ENST00000564603 959 ntBASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 AD001527.2-201ENST00000622994 785 ntBASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP6V0A1Q93050 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 AC098831.1-202ENST00000438821 336 ntBASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP6V0A1Q93050 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 SIRPAP1-201ENST00000448467 1770 ntBASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AC008735.5-201ENST00000623544 497 ntBASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 PMPCAP1-201ENST00000508114 1576 ntBASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP6V0A1Q93050 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 HTR7P1-202ENST00000624664 4411 ntBASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP6V0A1Q93050 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms