Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 AC109462.3-201ENST00000573934 613 ntBASIC18.98■□□□□ 0.63
SEMA4DQ92854 AC099336.1-202ENST00000602961 463 ntBASIC18.98■□□□□ 0.63
SEMA4DQ92854 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA4DQ92854 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 INTS4P1-201ENST00000438455 1935 ntBASIC18.98■□□□□ 0.63
SEMA4DQ92854 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA4DQ92854 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 CROCCP2-202ENST00000412962 2773 ntBASIC18.97■□□□□ 0.63
SEMA4DQ92854 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 HCG4P8-203ENST00000443049 980 ntBASIC18.97■□□□□ 0.63
SEMA4DQ92854 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.97■□□□□ 0.63
SEMA4DQ92854 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 AC108860.2-201ENST00000562760 2183 ntBASIC18.97■□□□□ 0.63
SEMA4DQ92854 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 KRT8P10-201ENST00000450021 1447 ntBASIC18.97■□□□□ 0.63
SEMA4DQ92854 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA4DQ92854 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 AC002558.1-201ENST00000488906 803 ntBASIC18.96■□□□□ 0.63
SEMA4DQ92854 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
SEMA4DQ92854 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEMA4DQ92854 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SEMA4DQ92854 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SEMA4DQ92854 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA4DQ92854 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA4DQ92854 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SEMA4DQ92854 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA4DQ92854 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEMA4DQ92854 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.95■□□□□ 0.62
SEMA4DQ92854 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.95■□□□□ 0.62
SEMA4DQ92854 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms