Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 MINOS1P3-201ENST00000457048 203 ntBASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 AC104692.2-201ENST00000603054 253 ntBASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHROOM3Q8TF72 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 AC108860.2-201ENST00000562760 2183 ntBASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 AC122714.2-201ENST00000502787 707 ntBASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 AC019129.2-201ENST00000609837 1235 ntBASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SHROOM3Q8TF72 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 INTS4P1-201ENST00000438455 1935 ntBASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM3Q8TF72 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHROOM3Q8TF72 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHROOM3Q8TF72 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 AC092119.3-201ENST00000612618 583 ntBASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 AC097374.2-201ENST00000618617 1306 ntBASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 IGHV3-41-201ENST00000613121 348 ntBASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM3Q8TF72 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms