Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AC097493.3-201ENST00000509725 367 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AC007952.6-201ENST00000573168 2673 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AC003957.1-201ENST00000625108 2673 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AL590787.1-201ENST00000568856 1315 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AL158211.3-201ENST00000607385 239 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 SPTLC1P1-201ENST00000447199 261 ntBASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 AC009477.1-201ENST00000452936 217 ntBASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 AC079140.1-201ENST00000508039 487 ntBASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
ALMS1Q8TCU4 PI4KAP1-204ENST00000612579 1703 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC079776.1-201ENST00000401540 1152 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC027307.3-201ENST00000594262 1100 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 SPTSSB-204ENST00000617024 1292 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 PHGDH-209ENST00000641074 1780 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC103564.2-201ENST00000432853 1299 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 RBPMS2P1-201ENST00000437762 623 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 ACA64.2-201ENST00000459014 129 ntBASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALMS1Q8TCU4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 AC245100.3-201ENST00000441281 285 ntBASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 PIN1P1-201ENST00000412108 996 ntBASIC11.76□□□□□ -0.53
ALMS1Q8TCU4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms