Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AP002383.4-201ENST00000442518 975 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 TSSC2-201ENST00000450217 709 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AP005901.3-202ENST00000581653 237 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 LYSMD4-203ENST00000378904 2122 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 AL023806.1-201ENST00000603994 1649 ntBASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH19Q8TAB3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 AC246785.2-201ENST00000432512 513 ntBASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 ATP5G2P1-201ENST00000433580 426 ntBASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH19Q8TAB3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms