Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCML4Q8N228 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCML4Q8N228 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.33■□□□□ 0.52
SCML4Q8N228 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.33■□□□□ 0.52
SCML4Q8N228 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML4Q8N228 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.33■□□□□ 0.52
SCML4Q8N228 SIGLEC30P-201ENST00000455569 941 ntBASIC18.33■□□□□ 0.52
SCML4Q8N228 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.33■□□□□ 0.52
SCML4Q8N228 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
SCML4Q8N228 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML4Q8N228 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.33■□□□□ 0.52
SCML4Q8N228 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCML4Q8N228 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCML4Q8N228 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML4Q8N228 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCML4Q8N228 AC068880.1-201ENST00000507289 2297 ntBASIC18.33■□□□□ 0.52
SCML4Q8N228 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.33■□□□□ 0.52
SCML4Q8N228 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SCML4Q8N228 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCML4Q8N228 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.32■□□□□ 0.52
SCML4Q8N228 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.32■□□□□ 0.52
SCML4Q8N228 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCML4Q8N228 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCML4Q8N228 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SCML4Q8N228 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCML4Q8N228 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCML4Q8N228 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.32■□□□□ 0.52
SCML4Q8N228 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.32■□□□□ 0.52
SCML4Q8N228 AC018712.1-201ENST00000455767 687 ntBASIC18.32■□□□□ 0.52
SCML4Q8N228 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.32■□□□□ 0.52
SCML4Q8N228 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.32■□□□□ 0.52
SCML4Q8N228 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.32■□□□□ 0.52
SCML4Q8N228 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.32■□□□□ 0.52
SCML4Q8N228 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML4Q8N228 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCML4Q8N228 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCML4Q8N228 KRT18P67-201ENST00000432816 1264 ntBASIC18.31■□□□□ 0.52
SCML4Q8N228 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.31■□□□□ 0.52
SCML4Q8N228 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 AL121894.2-201ENST00000602977 491 ntBASIC18.31■□□□□ 0.52
SCML4Q8N228 AC064862.7-201ENST00000604520 867 ntBASIC18.31■□□□□ 0.52
SCML4Q8N228 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCML4Q8N228 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML4Q8N228 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
SCML4Q8N228 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML4Q8N228 AC148477.5-201ENST00000625164 1645 ntBASIC18.31■□□□□ 0.52
SCML4Q8N228 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SCML4Q8N228 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCML4Q8N228 AL138688.1-201ENST00000624851 1594 ntBASIC18.3■□□□□ 0.52
SCML4Q8N228 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCML4Q8N228 FAM197Y8-203ENST00000450145 560 ntBASIC18.3■□□□□ 0.52
SCML4Q8N228 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.3■□□□□ 0.52
SCML4Q8N228 AC021087.4-201ENST00000563761 564 ntBASIC18.3■□□□□ 0.52
SCML4Q8N228 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.3■□□□□ 0.52
SCML4Q8N228 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.3■□□□□ 0.52
SCML4Q8N228 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCML4Q8N228 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCML4Q8N228 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCML4Q8N228 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms