Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 AL356309.3-201ENST00000624132 1934 ntBASIC19.17■□□□□ 0.66
VPS52Q8N1B4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 BICD1-207ENST00000551848 1962 ntBASIC19.17■□□□□ 0.66
VPS52Q8N1B4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VPS52Q8N1B4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 MIR1233-2-201ENST00000408138 82 ntBASIC19.16■□□□□ 0.66
VPS52Q8N1B4 MIR1233-1-201ENST00000408722 82 ntBASIC19.16■□□□□ 0.66
VPS52Q8N1B4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.16■□□□□ 0.66
VPS52Q8N1B4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS52Q8N1B4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS52Q8N1B4 HLA-J-201ENST00000462773 1622 ntBASIC19.14■□□□□ 0.66
VPS52Q8N1B4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
VPS52Q8N1B4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.14■□□□□ 0.66
VPS52Q8N1B4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 BX842568.4-201ENST00000421222 227 ntBASIC19.14■□□□□ 0.65
VPS52Q8N1B4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 IGHV3-22-201ENST00000520721 359 ntBASIC19.14■□□□□ 0.65
VPS52Q8N1B4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 OR7E14P-202ENST00000530490 1290 ntBASIC19.14■□□□□ 0.65
VPS52Q8N1B4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 AC104109.2-201ENST00000602919 1418 ntBASIC19.14■□□□□ 0.65
VPS52Q8N1B4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS52Q8N1B4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms