Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 VMA21-202ENST00000370361 693 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 AP005018.1-201ENST00000525475 301 ntBASIC25.91■■□□□ 1.74
ABCA6Q8N139 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 BAD-207ENST00000544785 525 ntTSL 3 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 AC140878.1-201ENST00000565277 250 ntBASIC25.91■■□□□ 1.74
ABCA6Q8N139 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC25.9■■□□□ 1.74
ABCA6Q8N139 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC25.9■■□□□ 1.74
ABCA6Q8N139 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.9■■□□□ 1.74
ABCA6Q8N139 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
ABCA6Q8N139 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
ABCA6Q8N139 AC073592.3-201ENST00000625118 1834 ntBASIC25.89■■□□□ 1.74
ABCA6Q8N139 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC25.89■■□□□ 1.74
ABCA6Q8N139 SLC25A39P2-201ENST00000537614 270 ntBASIC25.89■■□□□ 1.74
ABCA6Q8N139 AC243562.1-201ENST00000560672 389 ntBASIC25.89■■□□□ 1.74
ABCA6Q8N139 RARRES2P8-201ENST00000566335 367 ntBASIC25.89■■□□□ 1.74
ABCA6Q8N139 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ABCA6Q8N139 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA6Q8N139 TUBB3P1-201ENST00000405796 1332 ntBASIC25.89■■□□□ 1.73
ABCA6Q8N139 AC063926.2-201ENST00000623766 1308 ntBASIC25.89■■□□□ 1.73
ABCA6Q8N139 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA6Q8N139 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA6Q8N139 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC25.89■■□□□ 1.73
ABCA6Q8N139 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
ABCA6Q8N139 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
ABCA6Q8N139 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA6Q8N139 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA6Q8N139 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA6Q8N139 RPL30-202ENST00000396070 440 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 MIR943-201ENST00000401286 94 ntBASIC25.88■■□□□ 1.73
ABCA6Q8N139 RAC2-204ENST00000406508 893 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 BSG-214ENST00000614867 960 ntTSL 3 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.88■■□□□ 1.73
ABCA6Q8N139 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA6Q8N139 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ABCA6Q8N139 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 BASP1P1-201ENST00000430708 665 ntBASIC25.88■■□□□ 1.73
ABCA6Q8N139 AL592309.1-201ENST00000443127 649 ntBASIC25.88■■□□□ 1.73
ABCA6Q8N139 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 AL158211.3-201ENST00000607385 239 ntBASIC25.88■■□□□ 1.73
ABCA6Q8N139 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC25.88■■□□□ 1.73
ABCA6Q8N139 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 EFTUD1P1-204ENST00000560401 1798 ntBASIC25.87■■□□□ 1.73
ABCA6Q8N139 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 AC005237.2-201ENST00000434368 219 ntBASIC25.87■■□□□ 1.73
ABCA6Q8N139 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 INGX-202ENST00000489074 768 ntBASIC25.87■■□□□ 1.73
ABCA6Q8N139 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ABCA6Q8N139 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC25.87■■□□□ 1.73
ABCA6Q8N139 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms