Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.33■■□□□ 1
SLX4Q8IY92 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLX4Q8IY92 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLX4Q8IY92 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.33■■□□□ 1
SLX4Q8IY92 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLX4Q8IY92 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 CROCCP3-202ENST00000420820 1947 ntBASIC21.32■■□□□ 1
SLX4Q8IY92 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.32■■□□□ 1
SLX4Q8IY92 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.32■■□□□ 1
SLX4Q8IY92 AC005034.1-201ENST00000426657 489 ntBASIC21.32■■□□□ 1
SLX4Q8IY92 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.32■■□□□ 1
SLX4Q8IY92 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.32■■□□□ 1
SLX4Q8IY92 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.32■■□□□ 1
SLX4Q8IY92 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.32■■□□□ 1
SLX4Q8IY92 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.32■■□□□ 1
SLX4Q8IY92 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.32■■□□□ 1
SLX4Q8IY92 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.32■■□□□ 1
SLX4Q8IY92 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLX4Q8IY92 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.32■■□□□ 1
SLX4Q8IY92 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLX4Q8IY92 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLX4Q8IY92 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 AC055876.3-201ENST00000431496 288 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.31■■□□□ 1
SLX4Q8IY92 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.31■■□□□ 1
SLX4Q8IY92 AC002558.1-201ENST00000488906 803 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.31■■□□□ 1
SLX4Q8IY92 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 AC012645.4-201ENST00000610691 1061 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 AC138649.4-201ENST00000612222 287 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLX4Q8IY92 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.31■■□□□ 1
SLX4Q8IY92 AC093677.2-201ENST00000600169 1863 ntBASIC21.31■■□□□ 1
SLX4Q8IY92 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SLX4Q8IY92 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLX4Q8IY92 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.3■■□□□ 1
SLX4Q8IY92 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.3■■□□□ 1
SLX4Q8IY92 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.3■■□□□ 1
SLX4Q8IY92 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.3■■□□□ 1
SLX4Q8IY92 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.3■■□□□ 1
SLX4Q8IY92 AC005225.4-201ENST00000557330 545 ntBASIC21.3■■□□□ 1
SLX4Q8IY92 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.3■■□□□ 1
SLX4Q8IY92 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.3■■□□□ 1
SLX4Q8IY92 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLX4Q8IY92 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLX4Q8IY92 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SLX4Q8IY92 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLX4Q8IY92 FAM185BP-201ENST00000443595 716 ntBASIC21.29■■□□□ 1
SLX4Q8IY92 TSPY16P-201ENST00000449843 468 ntBASIC21.29■■□□□ 1
SLX4Q8IY92 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.29■■□□□ 1
SLX4Q8IY92 AC107918.2-201ENST00000530817 355 ntBASIC21.29■■□□□ 1
SLX4Q8IY92 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.29■■□□□ 1
SLX4Q8IY92 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLX4Q8IY92 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.29■■□□□ 1
SLX4Q8IY92 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLX4Q8IY92 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms