Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 FGFR3P6-201ENST00000457012 610 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 AL031008.1-201ENST00000619963 541 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 LINC01451-201ENST00000623792 534 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 AC073592.5-201ENST00000624854 528 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 AC132938.5-201ENST00000624980 1813 ntBASIC16.29■□□□□ 0.2
C9orf40Q8IXQ3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 HLA-J-201ENST00000462773 1622 ntBASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 IGHV3-52-201ENST00000519770 353 ntBASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 AL121912.1-201ENST00000603683 238 ntBASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf40Q8IXQ3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.27■□□□□ 0.2
C9orf40Q8IXQ3 STK25P1-201ENST00000585406 838 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms