Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 AP000593.1-201ENST00000393668 712 ntBASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 MIR4758-201ENST00000577688 71 ntBASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 AL365203.3-201ENST00000609742 2057 ntBASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 RCC2P3-201ENST00000418112 1537 ntBASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 AC078925.2-201ENST00000624013 1973 ntBASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 GUSBP6-202ENST00000438529 1198 ntBASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 PRSS44-201ENST00000515154 1146 ntBASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD2Q8IV50 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AC126177.1-201ENST00000547829 2218 ntBASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 PRKY-204ENST00000533551 1019 ntBASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AC004264.1-201ENST00000608354 794 ntBASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD2Q8IV50 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms