Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC28Q86X40 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC28Q86X40 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AP000523.1-201ENST00000398242 1049 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AC117947.1-201ENST00000427448 529 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 WWOX-216ENST00000569818 525 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 AC139887.4-201ENST00000607877 719 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 GPAT2P1-201ENST00000444924 1672 ntBASIC15.75■□□□□ 0.11
LRRC28Q86X40 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC28Q86X40 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC28Q86X40 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 AL109659.2-201ENST00000606809 1674 ntBASIC15.74■□□□□ 0.11
LRRC28Q86X40 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 RNF152P1-201ENST00000397754 604 ntBASIC15.74■□□□□ 0.11
LRRC28Q86X40 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 NEK4P2-201ENST00000580004 1012 ntBASIC15.74■□□□□ 0.11
LRRC28Q86X40 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms