Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 YBX1P2-201ENST00000489612 999 ntBASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 AC099343.3-201ENST00000605834 2503 ntBASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDDC2Q7Z4H3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 RNF152P1-201ENST00000397754 604 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 KRT18P48-201ENST00000434763 852 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 AL441883.1-201ENST00000566170 1045 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 LINC01238-205ENST00000567549 1107 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 AC116407.2-201ENST00000613639 860 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDDC2Q7Z4H3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC005521.1-201ENST00000393351 872 ntBASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC092647.4-201ENST00000457211 535 ntBASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.1■□□□□ 0.17
HDDC2Q7Z4H3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms