Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 KRT18P58-201ENST00000527480 1120 ntBASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 AC023511.2-201ENST00000618803 211 ntBASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBE3BQ7Z3V4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 NEFHP1-201ENST00000412845 2629 ntBASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 AC073621.1-201ENST00000392730 636 ntBASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 AC002558.1-201ENST00000488906 803 ntBASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 ZNF259P1-201ENST00000407656 1365 ntBASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.97■■□□□ 1.11
UBE3BQ7Z3V4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 MIR940-201ENST00000401276 94 ntBASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 STK19B-204ENST00000512515 211 ntBASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AC034105.1-201ENST00000563488 319 ntBASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AC006557.2-201ENST00000592985 1240 ntBASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AL356488.2-201ENST00000602755 427 ntBASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE3BQ7Z3V4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.95■■□□□ 1.11
UBE3BQ7Z3V4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.95■■□□□ 1.11
UBE3BQ7Z3V4 AC009336.1-201ENST00000608941 1553 ntBASIC21.95■■□□□ 1.11
UBE3BQ7Z3V4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UBE3BQ7Z3V4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 SIGLEC30P-201ENST00000455569 941 ntBASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 UNC93B6-202ENST00000528242 690 ntBASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 Z83851.2-201ENST00000609564 659 ntBASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 AL589182.2-201ENST00000619332 1049 ntBASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms