Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 LINC00265-3P-201ENST00000447588 903 ntBASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AC092329.2-201ENST00000598402 547 ntBASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AL353593.2-201ENST00000602529 1483 ntBASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 AL023806.1-201ENST00000603994 1649 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 POM121L3P-201ENST00000419331 1163 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 IGHV3-52-201ENST00000519770 353 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 AC012615.1-201ENST00000565797 1299 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 AC109462.3-201ENST00000573934 613 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 CROCCP2-202ENST00000412962 2773 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 INTS4P1-201ENST00000438455 1935 ntBASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COLCA1Q6ZS62 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 AC108860.2-201ENST00000562760 2183 ntBASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 AD001527.2-201ENST00000622994 785 ntBASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COLCA1Q6ZS62 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms