Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AL024508.2-201ENST00000607749 1894 ntBASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00575Q6W349 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00575Q6W349 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 REXO1L11P-201ENST00000620964 1927 ntBASIC11.21□□□□□ -0.62
LINC00575Q6W349 AL356309.3-201ENST00000624132 1934 ntBASIC11.21□□□□□ -0.62
LINC00575Q6W349 AC068587.6-202ENST00000641839 5619 ntBASIC11.21□□□□□ -0.62
LINC00575Q6W349 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
LINC00575Q6W349 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00575Q6W349 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC006449.5-201ENST00000610658 2098 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms