Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 RBM17P3-201ENST00000417687 1192 ntBASIC18.81■□□□□ 0.6
VSTM1Q6UX27 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
VSTM1Q6UX27 SLC25A6P5-201ENST00000435663 894 ntBASIC18.81■□□□□ 0.6
VSTM1Q6UX27 FDX1P1-201ENST00000449115 551 ntBASIC18.81■□□□□ 0.6
VSTM1Q6UX27 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VSTM1Q6UX27 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC138028.4-201ENST00000564984 1845 ntBASIC18.8■□□□□ 0.6
VSTM1Q6UX27 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC106795.1-205ENST00000512851 1056 ntBASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VSTM1Q6UX27 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AP002469.2-201ENST00000531724 424 ntBASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VSTM1Q6UX27 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 AL645608.8-201ENST00000606034 2086 ntBASIC18.78■□□□□ 0.6
VSTM1Q6UX27 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 PCDHA12-202ENST00000613593 2588 ntBASIC18.78■□□□□ 0.6
VSTM1Q6UX27 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VSTM1Q6UX27 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms