Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD4Q5XG99 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AL035633.1-201ENST00000406139 838 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 DDX43P3-201ENST00000441064 443 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 CXCL1P1-201ENST00000502804 216 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AC068137.2-201ENST00000605408 478 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AC092902.6-201ENST00000641783 218 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AL096828.2-201ENST00000567259 1965 ntBASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD4Q5XG99 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 AC093512.1-201ENST00000617969 520 ntBASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD4Q5XG99 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC138932.1-201ENST00000534164 6830 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 MYCLP1-201ENST00000372451 1075 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC004461.1-201ENST00000412461 403 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC025678.2-201ENST00000562061 970 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms