Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF20Q5VTR2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 FZD10-202ENST00000539839 3282 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 COX5BP2-201ENST00000392354 334 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 CHCHD2P8-201ENST00000429873 447 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 AC116407.4-201ENST00000623319 1061 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 PP12613-201ENST00000424958 2230 ntBASIC21.1■□□□□ 0.97
RNF20Q5VTR2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF20Q5VTR2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC246785.2-201ENST00000432512 513 ntBASIC21.09■□□□□ 0.97
RNF20Q5VTR2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC141586.5-201ENST00000624546 2050 ntBASIC21.09■□□□□ 0.97
RNF20Q5VTR2 AC010460.3-201ENST00000511359 1579 ntBASIC21.09■□□□□ 0.97
RNF20Q5VTR2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF20Q5VTR2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 AC139713.2-201ENST00000641328 2723 ntBASIC21.08■□□□□ 0.97
RNF20Q5VTR2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 AL023806.1-201ENST00000603994 1649 ntBASIC21.08■□□□□ 0.97
RNF20Q5VTR2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 PCED1CP-201ENST00000419887 785 ntBASIC21.08■□□□□ 0.97
RNF20Q5VTR2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 AC125634.1-201ENST00000438758 1403 ntBASIC21.08■□□□□ 0.97
RNF20Q5VTR2 VENTXP7-201ENST00000475503 772 ntBASIC21.08■□□□□ 0.97
RNF20Q5VTR2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF20Q5VTR2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF20Q5VTR2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms