Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 KRT8P10-201ENST00000450021 1447 ntBASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 AC003669.1-201ENST00000334569 611 ntBASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 AL139288.1-201ENST00000623748 933 ntBASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 AC073592.5-201ENST00000624854 528 ntBASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC178Q5BJE1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC178Q5BJE1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC178Q5BJE1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC178Q5BJE1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 FGFR3P6-201ENST00000457012 610 ntBASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 AC073592.4-201ENST00000623827 446 ntBASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC178Q5BJE1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 SIGLEC16-201ENST00000599858 1437 ntBASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 AL160237.2-201ENST00000556165 472 ntBASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 STK25P1-201ENST00000585406 838 ntBASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 AC079776.2-201ENST00000641154 1609 ntBASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC178Q5BJE1 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms