Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN20Q4JDL3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 LYSMD4-203ENST00000378904 2122 ntBASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 AL645608.8-201ENST00000606034 2086 ntBASIC18.58■□□□□ 0.57
PTPN20Q4JDL3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 AL049757.1-201ENST00000616842 1596 ntBASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN20Q4JDL3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 RCN1P2-201ENST00000398357 915 ntBASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 AC109462.3-201ENST00000573934 613 ntBASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 AC099336.1-202ENST00000602961 463 ntBASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 INTS4P1-201ENST00000438455 1935 ntBASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN20Q4JDL3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 HCG4P8-203ENST00000443049 980 ntBASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 CROCCP2-202ENST00000412962 2773 ntBASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN20Q4JDL3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms