Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.2□□□□□ -0.14
PAX9P55771 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 AL135905.2-201ENST00000584934 1404 ntBASIC14.19□□□□□ -0.14
PAX9P55771 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.19□□□□□ -0.14
PAX9P55771 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.19□□□□□ -0.14
PAX9P55771 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 TSPY17P-201ENST00000450329 467 ntBASIC14.19□□□□□ -0.14
PAX9P55771 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.19□□□□□ -0.14
PAX9P55771 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.19□□□□□ -0.14
PAX9P55771 AC008687.5-201ENST00000593746 558 ntBASIC14.19□□□□□ -0.14
PAX9P55771 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.19□□□□□ -0.14
PAX9P55771 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PAX9P55771 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.19□□□□□ -0.14
PAX9P55771 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX9P55771 AC026691.1-201ENST00000602502 2017 ntBASIC14.19□□□□□ -0.14
PAX9P55771 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.19□□□□□ -0.14
PAX9P55771 RNF216P1-203ENST00000404404 2427 ntBASIC14.19□□□□□ -0.14
PAX9P55771 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
PAX9P55771 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
PAX9P55771 LINC02012-201ENST00000608206 1725 ntBASIC14.18□□□□□ -0.14
PAX9P55771 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PAX9P55771 PCDHA1-201ENST00000378133 2726 ntBASIC14.18□□□□□ -0.14
PAX9P55771 LINC01311-201ENST00000565162 1445 ntBASIC14.18□□□□□ -0.14
PAX9P55771 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.18□□□□□ -0.14
PAX9P55771 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.18□□□□□ -0.14
PAX9P55771 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PAX9P55771 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PAX9P55771 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.18□□□□□ -0.14
PAX9P55771 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PAX9P55771 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 AC008741.2-201ENST00000612792 3115 ntBASIC14.17□□□□□ -0.14
PAX9P55771 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms