Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MIR4758-201ENST00000577688 71 ntBASIC13.31□□□□□ -0.28
FOXA3P55318 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
FOXA3P55318 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXA3P55318 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXA3P55318 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXA3P55318 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXA3P55318 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
FOXA3P55318 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
FOXA3P55318 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXA3P55318 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FOXA3P55318 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FOXA3P55318 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.3□□□□□ -0.28
FOXA3P55318 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
FOXA3P55318 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 AC026185.1-201ENST00000445748 174 ntBASIC13.3□□□□□ -0.28
FOXA3P55318 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
FOXA3P55318 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXA3P55318 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
FOXA3P55318 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXA3P55318 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXA3P55318 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FOXA3P55318 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXA3P55318 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FOXA3P55318 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
FOXA3P55318 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXA3P55318 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 AL023284.2-201ENST00000405850 579 ntBASIC13.29□□□□□ -0.28
FOXA3P55318 AC004951.3-201ENST00000418645 1148 ntBASIC13.29□□□□□ -0.28
FOXA3P55318 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXA3P55318 MCCD1P1-208ENST00000445732 328 ntBASIC13.29□□□□□ -0.28
FOXA3P55318 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXA3P55318 AL162430.1-201ENST00000480705 870 ntBASIC13.29□□□□□ -0.28
FOXA3P55318 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXA3P55318 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXA3P55318 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXA3P55318 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms