Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
NCKAP1LP55160 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCKAP1LP55160 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 RN7SL510P-201ENST00000581311 263 ntBASIC19.31■□□□□ 0.68
NCKAP1LP55160 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 AL139327.4-201ENST00000612362 153 ntBASIC19.31■□□□□ 0.68
NCKAP1LP55160 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 AL355877.3-201ENST00000622820 899 ntBASIC19.31■□□□□ 0.68
NCKAP1LP55160 AC073592.4-201ENST00000623827 446 ntBASIC19.31■□□□□ 0.68
NCKAP1LP55160 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKAP1LP55160 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKAP1LP55160 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 LINC00896-202ENST00000609602 2128 ntBASIC19.3■□□□□ 0.68
NCKAP1LP55160 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 AC003669.1-201ENST00000334569 611 ntBASIC19.3■□□□□ 0.68
NCKAP1LP55160 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 FGFR3P6-201ENST00000457012 610 ntBASIC19.3■□□□□ 0.68
NCKAP1LP55160 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 AL691432.3-201ENST00000621860 400 ntBASIC19.3■□□□□ 0.68
NCKAP1LP55160 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKAP1LP55160 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NCKAP1LP55160 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 SIGLEC16-201ENST00000599858 1437 ntBASIC19.29■□□□□ 0.68
NCKAP1LP55160 LYSMD4-203ENST00000378904 2122 ntBASIC19.29■□□□□ 0.68
NCKAP1LP55160 SPDYE21P-201ENST00000413323 827 ntBASIC19.29■□□□□ 0.68
NCKAP1LP55160 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 AC008608.2-201ENST00000606089 416 ntBASIC19.29■□□□□ 0.68
NCKAP1LP55160 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1LP55160 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 AC079776.2-201ENST00000641154 1609 ntBASIC19.29■□□□□ 0.68
NCKAP1LP55160 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKAP1LP55160 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1LP55160 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1LP55160 KLF4P1-201ENST00000412782 1185 ntBASIC19.28■□□□□ 0.68
NCKAP1LP55160 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms