Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 REXO1L11P-201ENST00000620964 1927 ntBASIC18.9■□□□□ 0.62
RAD23BP54727 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAD23BP54727 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAD23BP54727 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAD23BP54727 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAD23BP54727 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
RAD23BP54727 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RAD23BP54727 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RAD23BP54727 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RAD23BP54727 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 GNAS-203ENST00000306120 1878 ntBASIC18.89■□□□□ 0.61
RAD23BP54727 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 COX5BP2-201ENST00000392354 334 ntBASIC18.89■□□□□ 0.61
RAD23BP54727 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD23BP54727 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD23BP54727 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD23BP54727 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.89■□□□□ 0.61
RAD23BP54727 AC099336.1-202ENST00000602961 463 ntBASIC18.89■□□□□ 0.61
RAD23BP54727 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAD23BP54727 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.89■□□□□ 0.61
RAD23BP54727 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.89■□□□□ 0.61
RAD23BP54727 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD23BP54727 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD23BP54727 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD23BP54727 TP73-AS1-210ENST00000637775 1455 ntBASIC18.89■□□□□ 0.61
RAD23BP54727 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAD23BP54727 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.89■□□□□ 0.61
RAD23BP54727 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAD23BP54727 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.88■□□□□ 0.61
RAD23BP54727 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.88■□□□□ 0.61
RAD23BP54727 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
RAD23BP54727 MIR3652-201ENST00000579335 131 ntBASIC18.88■□□□□ 0.61
RAD23BP54727 AC011467.2-201ENST00000598425 242 ntBASIC18.88■□□□□ 0.61
RAD23BP54727 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 BX276092.7-203ENST00000637198 1536 ntBASIC18.88■□□□□ 0.61
RAD23BP54727 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAD23BP54727 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
RAD23BP54727 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RAD23BP54727 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAD23BP54727 AC099398.1-201ENST00000567919 2776 ntBASIC18.87■□□□□ 0.61
RAD23BP54727 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD23BP54727 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.87■□□□□ 0.61
RAD23BP54727 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD23BP54727 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAD23BP54727 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.87■□□□□ 0.61
RAD23BP54727 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.87■□□□□ 0.61
RAD23BP54727 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAD23BP54727 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.87■□□□□ 0.61
RAD23BP54727 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAD23BP54727 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.87■□□□□ 0.61
RAD23BP54727 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RAD23BP54727 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAD23BP54727 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAD23BP54727 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAD23BP54727 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms