Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 RNA5SP413-201ENST00000516373 109 ntBASIC15.26■□□□□ 0.03
CBX5P45973 RN7SL471P-201ENST00000580476 299 ntBASIC15.26■□□□□ 0.03
CBX5P45973 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.26■□□□□ 0.03
CBX5P45973 AC104771.1-201ENST00000603335 964 ntBASIC15.26■□□□□ 0.03
CBX5P45973 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CBX5P45973 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CBX5P45973 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.26■□□□□ 0.03
CBX5P45973 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CBX5P45973 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CBX5P45973 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 AC022898.2-201ENST00000616822 1312 ntBASIC15.25■□□□□ 0.03
CBX5P45973 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.25■□□□□ 0.03
CBX5P45973 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.25■□□□□ 0.03
CBX5P45973 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.25■□□□□ 0.03
CBX5P45973 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CBX5P45973 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CBX5P45973 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CBX5P45973 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CBX5P45973 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CBX5P45973 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CBX5P45973 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.24■□□□□ 0.03
CBX5P45973 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.24■□□□□ 0.03
CBX5P45973 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.24■□□□□ 0.03
CBX5P45973 DGCR10-201ENST00000609839 495 ntBASIC15.24■□□□□ 0.03
CBX5P45973 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms