Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SSR1P43307 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SSR1P43307 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 SPDYE15P-201ENST00000424157 909 ntBASIC18.83■□□□□ 0.6
SSR1P43307 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.83■□□□□ 0.6
SSR1P43307 YBX1P2-201ENST00000489612 999 ntBASIC18.83■□□□□ 0.6
SSR1P43307 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.83■□□□□ 0.6
SSR1P43307 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.83■□□□□ 0.6
SSR1P43307 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SSR1P43307 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.83■□□□□ 0.6
SSR1P43307 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.83■□□□□ 0.6
SSR1P43307 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.83■□□□□ 0.6
SSR1P43307 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SSR1P43307 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.83■□□□□ 0.6
SSR1P43307 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSR1P43307 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSR1P43307 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SSR1P43307 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SSR1P43307 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.82■□□□□ 0.6
SSR1P43307 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SSR1P43307 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
SSR1P43307 AC012313.1-201ENST00000593393 3059 ntBASIC18.82■□□□□ 0.6
SSR1P43307 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.82■□□□□ 0.6
SSR1P43307 FAM8A6P-201ENST00000407496 1135 ntBASIC18.82■□□□□ 0.6
SSR1P43307 AC211429.1-201ENST00000415277 523 ntBASIC18.82■□□□□ 0.6
SSR1P43307 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.82■□□□□ 0.6
SSR1P43307 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SSR1P43307 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.82■□□□□ 0.6
SSR1P43307 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.82■□□□□ 0.6
SSR1P43307 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSR1P43307 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.82■□□□□ 0.6
SSR1P43307 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SSR1P43307 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSR1P43307 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SSR1P43307 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSR1P43307 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.81■□□□□ 0.6
SSR1P43307 KRT18P48-201ENST00000434763 852 ntBASIC18.81■□□□□ 0.6
SSR1P43307 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
SSR1P43307 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 AC097493.4-201ENST00000641197 219 ntBASIC18.81■□□□□ 0.6
SSR1P43307 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSR1P43307 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.81■□□□□ 0.6
SSR1P43307 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
SSR1P43307 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR1P43307 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
SSR1P43307 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms