Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.67■□□□□ 0.74
HTTP42858 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.67■□□□□ 0.74
HTTP42858 COX5BP2-201ENST00000392354 334 ntBASIC19.67■□□□□ 0.74
HTTP42858 AL592309.1-201ENST00000443127 649 ntBASIC19.67■□□□□ 0.74
HTTP42858 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HTTP42858 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.67■□□□□ 0.74
HTTP42858 AL158211.3-201ENST00000607385 239 ntBASIC19.67■□□□□ 0.74
HTTP42858 AL358472.5-202ENST00000641448 1267 ntBASIC19.67■□□□□ 0.74
HTTP42858 CU639417.3-201ENST00000624240 1404 ntBASIC19.67■□□□□ 0.74
HTTP42858 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HTTP42858 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 PIN1P1-201ENST00000412108 996 ntBASIC19.67■□□□□ 0.74
HTTP42858 AL033527.4-201ENST00000641026 673 ntBASIC19.67■□□□□ 0.74
HTTP42858 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.67■□□□□ 0.74
HTTP42858 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HTTP42858 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 AC027307.3-201ENST00000594262 1100 ntBASIC19.67■□□□□ 0.74
HTTP42858 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.67■□□□□ 0.74
HTTP42858 AC084121.4-201ENST00000641598 221 ntBASIC19.67■□□□□ 0.74
HTTP42858 AF228730.8-201ENST00000642140 221 ntBASIC19.67■□□□□ 0.74
HTTP42858 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.66■□□□□ 0.74
HTTP42858 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.66■□□□□ 0.74
HTTP42858 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.66■□□□□ 0.74
HTTP42858 GGTLC5P-201ENST00000617623 998 ntBASIC19.66■□□□□ 0.74
HTTP42858 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.66■□□□□ 0.74
HTTP42858 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.66■□□□□ 0.74
HTTP42858 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HTTP42858 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.66■□□□□ 0.74
HTTP42858 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.66■□□□□ 0.74
HTTP42858 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.66■□□□□ 0.74
HTTP42858 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.66■□□□□ 0.74
HTTP42858 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTTP42858 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.65■□□□□ 0.74
HTTP42858 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 DDX43P3-201ENST00000441064 443 ntBASIC19.65■□□□□ 0.74
HTTP42858 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 AC079140.1-201ENST00000508039 487 ntBASIC19.65■□□□□ 0.74
HTTP42858 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 STK25P1-201ENST00000585406 838 ntBASIC19.65■□□□□ 0.74
HTTP42858 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HTTP42858 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTTP42858 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HTTP42858 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.65■□□□□ 0.74
HTTP42858 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.65■□□□□ 0.74
HTTP42858 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTTP42858 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
HTTP42858 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTTP42858 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HTTP42858 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HTTP42858 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.64■□□□□ 0.73
HTTP42858 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.64■□□□□ 0.73
HTTP42858 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 PI4KAP1-204ENST00000612579 1703 ntBASIC19.64■□□□□ 0.73
HTTP42858 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HTTP42858 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTTP42858 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms