Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.62■□□□□ 0.57
GRIK1P39086 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.62■□□□□ 0.57
GRIK1P39086 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.62■□□□□ 0.57
GRIK1P39086 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
GRIK1P39086 AC021087.4-201ENST00000563761 564 ntBASIC18.62■□□□□ 0.57
GRIK1P39086 AP001005.1-201ENST00000571755 1248 ntBASIC18.62■□□□□ 0.57
GRIK1P39086 NKAPP1-205ENST00000585790 367 ntBASIC18.62■□□□□ 0.57
GRIK1P39086 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.62■□□□□ 0.57
GRIK1P39086 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GRIK1P39086 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.62■□□□□ 0.57
GRIK1P39086 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIK1P39086 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
GRIK1P39086 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GRIK1P39086 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.61■□□□□ 0.57
GRIK1P39086 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 AL031284.1-201ENST00000419297 478 ntBASIC18.61■□□□□ 0.57
GRIK1P39086 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 AL139288.1-201ENST00000623748 933 ntBASIC18.61■□□□□ 0.57
GRIK1P39086 AC073592.5-201ENST00000624854 528 ntBASIC18.61■□□□□ 0.57
GRIK1P39086 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GRIK1P39086 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIK1P39086 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIK1P39086 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 AL049757.1-201ENST00000616842 1596 ntBASIC18.6■□□□□ 0.57
GRIK1P39086 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
GRIK1P39086 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 AC109462.3-201ENST00000573934 613 ntBASIC18.6■□□□□ 0.57
GRIK1P39086 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
GRIK1P39086 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIK1P39086 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIK1P39086 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
GRIK1P39086 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms